Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette subfamily b protein | LV84_00927 | Not Available | Negative | 1048766 - 1050556 | 66626.7 |
| leucine dehydrogenase | LV84_00928 | Not Available | Positive | 1050703 - 1051803 | 39506.7 |
| nusb antitermination factor | LV84_00929 | Not Available | Positive | 1051919 - 1053103 | 45257.0 |
| gas vesicle protein | LV84_00930 | Not Available | Positive | 1053111 - 1053413 | 10880.0 |
| uncharacterized protein duf1573 | LV84_00931 | Not Available | Positive | 1053419 - 1053961 | 18977.6 |
| preprotein translocase subunit yajc | LV84_00932 | Not Available | Positive | 1053964 - 1054281 | 11581.3 |
| hypothetical protein | LV84_00933 | Not Available | Positive | 1054290 - 1055255 | 36371.1 |
| dephospho-coa kinase | LV84_00934 | Not Available | Positive | 1055260 - 1055853 | 21896.4 |
| hypothetical protein | LV84_00935 | Not Available | Positive | 1056035 - 1056829 | 29523.4 |
| protein of unknown function (duf3037) | LV84_00936 | Not Available | Positive | 1056807 - 1057190 | 14614.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
