Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf4271 | LV84_00917 | Not Available | Negative | 1037525 - 1038646 | 43343.9 |
| outer membrane protein assembly factor bama | LV84_00918 | Not Available | Negative | 1038649 - 1040337 | 63964.7 |
| oxygen-independent coproporphyrinogen-3 oxidase | LV84_00919 | Not Available | Positive | 1040501 - 1041520 | 38411.4 |
| uncharacterized protein duf721 | LV84_00920 | Not Available | Positive | 1041533 - 1041844 | 11678.3 |
| serine phosphatase rsbu (regulator of sigma subunit) | LV84_00921 | Not Available | Positive | 1041955 - 1044033 | 79280.6 |
| anti-sigma b factor antagonist | LV84_00922 | Not Available | Positive | 1044037 - 1044369 | 12118.5 |
| serine/threonine-protein kinase rsbw | LV84_00923 | Not Available | Positive | 1044371 - 1044784 | 15624.3 |
| peptidyl-prolyl cis-trans isomerase sura | LV84_00924 | Not Available | Positive | 1044872 - 1046872 | 75771.0 |
| periplasmic chaperone for outer membrane proteins sura | LV84_00925 | Not Available | Positive | 1046928 - 1048292 | 51092.9 |
| hypothetical protein | LV84_00926 | Not Available | Negative | 1048353 - 1048673 | 12168.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
