Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc carboxypeptidase | LV84_00887 | Not Available | Negative | 1002926 - 1004533 | 58823.7 |
| nucleotide-binding universal stress uspa family protein | LV84_00888 | Not Available | Positive | 1004790 - 1005707 | 34737.1 |
| kef-type k+ transport system membrane component kefb | LV84_00889 | Not Available | Positive | 1005711 - 1006946 | 44563.1 |
| ferrochelatase | LV84_00890 | Not Available | Positive | 1007181 - 1008218 | 39144.2 |
| phosphoribosylformylglycinamidine cyclo-ligase | LV84_00891 | Not Available | Positive | 1008811 - 1009974 | 42593.6 |
| neutral/alkaline ceramidase-like enzyme | LV84_00892 | Not Available | Positive | 1010159 - 1011505 | 50260.5 |
| uncharacterized protein duf983 | LV84_00893 | Not Available | Positive | 1011597 - 1011983 | 14571.0 |
| hypothetical protein | LV84_00894 | Not Available | Negative | 1012055 - 1012699 | 25129.5 |
| glutaryl-coa dehydrogenase | LV84_00895 | Not Available | Positive | 1012843 - 1014201 | 50065.8 |
| hypothetical protein | LV84_00896 | Not Available | Negative | 1014198 - 1014971 | 29560.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
