Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_00077 | Not Available | Positive | 93000 - 93725 | 27196.6 |
| 2-amino-3-ketobutyrate coenzyme a ligase | LV84_00078 | Not Available | Negative | 93886 - 95082 | 43568.5 |
| nucleoside-diphosphate-sugar epimerase | LV84_00079 | Not Available | Positive | 95239 - 96186 | 36011.0 |
| cytochrome c | LV84_00080 | Not Available | Positive | 96657 - 99395 | 103398.0 |
| uncharacterized protein duf1501 | LV84_00081 | Not Available | Positive | 99457 - 100962 | 55671.4 |
| hydroxypyruvate isomerase | LV84_00082 | Not Available | Positive | 100969 - 101841 | 33303.8 |
| putative membrane protein | LV84_00083 | Not Available | Positive | 101834 - 103216 | 51544.6 |
| arsenate reductase | LV84_00084 | Not Available | Negative | 103445 - 103798 | 13331.1 |
| glutamate-1-semialdehyde 2,1-aminomutase | LV84_00085 | Not Available | Negative | 104135 - 105430 | 46179.0 |
| substrate-binding family protein | LV84_00086 | Not Available | Negative | 105433 - 107082 | 61283.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
