Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-lactamase regulating signal transducer with metallopeptidase domain | LV84_00867 | Not Available | Negative | 984129 - 986126 | 76320.3 |
| putative transcriptional regulator | LV84_00868 | Not Available | Negative | 986126 - 986497 | 14035.8 |
| hypothetical protein | LV84_00869 | Not Available | Negative | 986850 - 987044 | 7050.73 |
| n-ethylmaleimide reductase | LV84_00870 | Not Available | Positive | 987578 - 988690 | 41446.0 |
| uncharacterized protein with nrde domain | LV84_00871 | Not Available | Positive | 988732 - 989496 | 29336.9 |
| thioredoxin reductase (nadph) | LV84_00872 | Not Available | Positive | 989503 - 990477 | 36428.9 |
| wd40 repeat protein | LV84_00873 | Not Available | Negative | 990696 - 992627 | 71649.4 |
| hypothetical protein | LV84_00874 | Not Available | Negative | 992783 - 993271 | 17852.0 |
| cysteine-rich domain-containing protein | LV84_00875 | Not Available | Negative | 993556 - 994347 | 28663.7 |
| 4fe-4s dicluster protein | LV84_00876 | Not Available | Negative | 994526 - 995860 | 50555.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
