Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate--l-alanine ligase | LV84_00857 | Not Available | Negative | 971985 - 973397 | 51967.5 |
| udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferase | LV84_00858 | Not Available | Negative | 973394 - 974479 | 39010.6 |
| cell division protein ftsw | LV84_00859 | Not Available | Negative | 974506 - 975672 | 41849.1 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | LV84_00860 | Not Available | Negative | 975669 - 977018 | 48508.1 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | LV84_00861 | Not Available | Negative | 977024 - 978235 | 44509.7 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | LV84_00862 | Not Available | Negative | 978237 - 979700 | 53358.3 |
| cell division protein ftsi (penicillin-binding protein 3) | LV84_00863 | Not Available | Negative | 979701 - 981809 | 77821.3 |
| hypothetical protein | LV84_00864 | Not Available | Negative | 981806 - 982189 | 14331.5 |
| 16s rrna (cytosine1402-n4)-methyltransferase | LV84_00865 | Not Available | Negative | 982186 - 983097 | 33953.6 |
| mraz protein | LV84_00866 | Not Available | Negative | 983102 - 983536 | 16342.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
