Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sss family solute:na+ symporter | LV84_00837 | Not Available | Positive | 950926 - 952470 | 55969.2 |
| inositol oxygenase | LV84_00838 | Not Available | Positive | 952475 - 953293 | 31781.5 |
| alkylation response protein aidb-like acyl-coa dehydrogenase | LV84_00839 | Not Available | Positive | 953839 - 954981 | 41466.7 |
| glycerol uptake facilitator protein | LV84_00840 | Not Available | Negative | 955172 - 955906 | 25045.0 |
| glycerol kinase | LV84_00841 | Not Available | Negative | 955903 - 957405 | 55542.3 |
| glycerol-3-phosphate dehydrogenase | LV84_00842 | Not Available | Negative | 957413 - 958978 | 57795.1 |
| histidine phosphatase superfamily protein (branch 1) | LV84_00843 | Not Available | Negative | 959064 - 959561 | 18353.8 |
| 23s rrna pseudouridine1911/1915/1917 synthase | LV84_00844 | Not Available | Negative | 959748 - 960482 | 28230.2 |
| nlpe-like protein | LV84_00845 | Not Available | Positive | 960870 - 961343 | 17572.6 |
| lysr family hydrogen peroxide-inducible transcriptional activator | LV84_00846 | Not Available | Negative | 961347 - 962279 | 35524.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
