Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna1val (adenine37-n6)-methyltransferase | LV84_00827 | Not Available | Negative | 936569 - 937276 | 26690.7 |
| uncharacterized protein yebe (upf0316 family) | LV84_00828 | Not Available | Negative | 937276 - 937878 | 23000.3 |
| cp family cyanate transporter-like mfs transporter | LV84_00829 | Not Available | Negative | 937948 - 939114 | 42107.0 |
| helix-turn-helix protein | LV84_00830 | Not Available | Negative | 939736 - 940545 | 30275.4 |
| dna polymerase-4 | LV84_00831 | Not Available | Positive | 940615 - 941763 | 42955.4 |
| dna polymerase-3 subunit alpha | LV84_00832 | Not Available | Positive | 941765 - 944731 | 113328.0 |
| 2'-5' rna ligase | LV84_00833 | Not Available | Positive | 944759 - 945340 | 22710.5 |
| hypothetical protein | LV84_00834 | Not Available | Negative | 945369 - 945986 | 23544.7 |
| n-6 dna methylase | LV84_00835 | Not Available | Negative | 945989 - 948973 | 114765.0 |
| hypothetical protein | LV84_00836 | Not Available | Negative | 949268 - 950677 | 51321.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
