Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_00817 | Not Available | Positive | 925465 - 926691 | 45870.9 |
| hypothetical protein | LV84_00818 | Not Available | Negative | 926837 - 927094 | 10000.1 |
| carbamoyl-phosphate synthase large subunit | LV84_00819 | Not Available | Negative | 927216 - 930035 | 104594.0 |
| 2-dehydro-3-deoxygluconokinase | LV84_00820 | Not Available | Positive | 930321 - 931316 | 36498.2 |
| 2-dehydro-3-deoxyphosphogluconate aldolase/(4s)-4-hydroxy-2-oxoglutarate aldolase | LV84_00821 | Not Available | Positive | 931325 - 931987 | 24273.4 |
| peptidyl-dipeptidase dcp | LV84_00822 | Not Available | Negative | 932046 - 932552 | 19565.8 |
| uncharacterized protein upf0158 | LV84_00823 | Not Available | Negative | 932822 - 933259 | 17582.5 |
| putative esterase | LV84_00824 | Not Available | Negative | 933355 - 934002 | 24819.3 |
| cytidine deaminase | LV84_00825 | Not Available | Negative | 934007 - 934489 | 17881.5 |
| saccharopine dehydrogenase (nadp+, l-glutamate forming) | LV84_00826 | Not Available | Positive | 934762 - 936093 | 50158.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
