Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine527-n7)-methyltransferase | LV84_00807 | Not Available | Positive | 908601 - 909245 | 25043.2 |
| outer membrane receptor protein involved in fe transport | LV84_00808 | Not Available | Positive | 909925 - 912741 | 105721.0 |
| glpgli family protein | LV84_00809 | Not Available | Positive | 913042 - 913785 | 29165.3 |
| dna polymerase-3 subunit alpha | LV84_00810 | Not Available | Positive | 914238 - 918524 | 160089.0 |
| thioredoxin | LV84_00811 | Not Available | Positive | 918763 - 919083 | 11359.8 |
| trna 2-selenouridine synthase | LV84_00812 | Not Available | Positive | 919150 - 920196 | 39717.2 |
| selenophosphate synthase | LV84_00813 | Not Available | Positive | 920177 - 921220 | 37410.9 |
| hypothetical protein | LV84_00814 | Not Available | Negative | 921418 - 921588 | 6600.11 |
| lamin tail-like protein | LV84_00815 | Not Available | Negative | 921660 - 924182 | 93567.2 |
| aspartate-semialdehyde dehydrogenase | LV84_00816 | Not Available | Positive | 924476 - 925465 | 36172.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
