Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nfed-like partner-binding protein | LV84_00067 | Not Available | Negative | 83055 - 83513 | 16241.0 |
| prolyl-trna synthetase | LV84_00068 | Not Available | Negative | 83615 - 85096 | 55946.8 |
| hypothetical protein | LV84_00069 | Not Available | Positive | 85219 - 86571 | 48582.2 |
| long-subunit fatty acid transport protein | LV84_00070 | Not Available | Positive | 86750 - 88255 | 54963.3 |
| shikimate kinase | LV84_00071 | Not Available | Negative | 88245 - 88775 | 19853.1 |
| doxx-like protein | LV84_00072 | Not Available | Negative | 88779 - 89879 | 41084.6 |
| uncharacterized protein duf1599 | LV84_00073 | Not Available | Negative | 89872 - 90417 | 21442.7 |
| dihydropteroate synthase | LV84_00074 | Not Available | Positive | 90432 - 91316 | 32725.5 |
| uncharacterized protein (tigr00159 family) | LV84_00075 | Not Available | Positive | 91313 - 92194 | 32899.8 |
| hypothetical protein | LV84_00076 | Not Available | Negative | 92225 - 92476 | 9536.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
