Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| propionyl-coa carboxylase beta chain | LV84_00777 | Not Available | Negative | 878423 - 880000 | 57391.8 |
| exopolyphosphatase/guanosine-5'-triphosphate, 3'-diphosphate pyrophosphatase | LV84_00778 | Not Available | Positive | 880436 - 881377 | 35275.9 |
| ldh2 family malate/lactate/ureidoglycolate dehydrogenase | LV84_00779 | Not Available | Positive | 881450 - 882520 | 38083.6 |
| hypothetical protein | LV84_00780 | Not Available | Positive | 882895 - 883356 | 16463.5 |
| secreted protein | LV84_00781 | Not Available | Positive | 883500 - 884867 | 51217.3 |
| ribosomal protein s18 acetylase rimi-like enzyme | LV84_00782 | Not Available | Positive | 884959 - 885453 | 18824.8 |
| trna pseudouridine38-40 synthase | LV84_00783 | Not Available | Negative | 885590 - 886375 | 30155.9 |
| hypothetical protein | LV84_00784 | Not Available | Negative | 886454 - 887656 | 45598.3 |
| uncharacterized protein duf4160 | LV84_00785 | Not Available | Positive | 888035 - 888283 | 9782.65 |
| uncharacterized protein duf2442 | LV84_00786 | Not Available | Positive | 888288 - 888518 | 8760.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
