Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hexosaminidase | LV84_00766 | Not Available | Negative | 856938 - 858566 | 61603.6 |
| cellobiose phosphorylase | LV84_00767 | Not Available | Positive | 858948 - 867641 | 330281.0 |
| ktsc domain-containing protein | LV84_00768 | Not Available | Positive | 867999 - 868445 | 17348.8 |
| adenylosuccinate synthetase | LV84_00769 | Not Available | Positive | 868874 - 870208 | 49316.5 |
| gliding motility-associated-like protein | LV84_00770 | Not Available | Positive | 870317 - 872653 | 85552.8 |
| type ix secretion system porp/sprf family membrane protein | LV84_00771 | Not Available | Positive | 872650 - 873672 | 38444.4 |
| uncharacterized protein duf1080 | LV84_00773 | Not Available | Negative | 874839 - 875435 | 22176.4 |
| uncharacterized protein duf1080 | LV84_00774 | Not Available | Negative | 875545 - 876309 | 28452.0 |
| substrate-binding family protein | LV84_00775 | Not Available | Negative | 876520 - 877278 | 28752.9 |
| putative aminopeptidase frvx | LV84_00776 | Not Available | Negative | 877324 - 878388 | 39271.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
