Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding padr family transcriptional regulator | LV84_00746 | Not Available | Negative | 833896 - 834243 | 13130.9 |
| l-glutaminase | LV84_00747 | Not Available | Positive | 834494 - 835408 | 33771.3 |
| putative hydrophobic protein (tigr00341 family) | LV84_00748 | Not Available | Negative | 835443 - 836855 | 52941.8 |
| response regulator receiver domain-containing protein | LV84_00749 | Not Available | Positive | 837291 - 837662 | 14027.0 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | LV84_00750 | Not Available | Positive | 837722 - 838519 | 28897.9 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | LV84_00751 | Not Available | Positive | 838522 - 839274 | 27813.7 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | LV84_00752 | Not Available | Positive | 839271 - 840248 | 35645.7 |
| endonuclease/exonuclease/phosphatase (eep) superfamily protein yafd | LV84_00753 | Not Available | Negative | 840420 - 841478 | 40340.9 |
| aconitate hydratase | LV84_00754 | Not Available | Positive | 841632 - 844409 | 102249.0 |
| tonb family protein | LV84_00755 | Not Available | Negative | 844528 - 845292 | 29240.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
