Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 792555 - 792639 | Not Available |
| uncharacterized protein (duf885 family) | LV84_00707 | Not Available | Negative | 792762 - 794609 | 69786.4 |
| membrane protein | LV84_00708 | Not Available | Negative | 794714 - 795700 | 37557.1 |
| acyl-coa thioester hydrolase | LV84_00709 | Not Available | Negative | 795711 - 796118 | 16176.4 |
| upf0755 protein | LV84_00710 | Not Available | Negative | 796120 - 797166 | 39812.4 |
| 8-oxo-dgtp diphosphatase | LV84_00711 | Not Available | Positive | 797253 - 797687 | 16533.0 |
| trna threonylcarbamoyl adenosine modification protein (sua5/ycio/yrdc/ywlc family) | LV84_00712 | Not Available | Positive | 797691 - 798320 | 23559.7 |
| wbqc-like protein | LV84_00713 | Not Available | Positive | 798322 - 798948 | 24327.3 |
| atp-dependent clp protease atp-binding subunit clpc | LV84_00714 | Not Available | Positive | 799030 - 801555 | 93697.9 |
| rna polymerase sigma-70 factor (ecf subfamily) | LV84_00715 | Not Available | Positive | 802072 - 802563 | 18719.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
