Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | LV84_00696 | Not Available | Negative | 784465 - 785538 | 40867.4 |
| dihydrodipicolinate reductase | LV84_00697 | Not Available | Negative | 785554 - 786276 | 26398.4 |
| hypothetical protein | LV84_00698 | Not Available | Negative | 786279 - 786890 | 22912.7 |
| parb family chromosome partitioning protein | LV84_00699 | Not Available | Negative | 786896 - 787807 | 34117.4 |
| chromosome partitioning protein | LV84_00700 | Not Available | Negative | 787810 - 788592 | 28576.8 |
| methyltransferase family protein | LV84_00701 | Not Available | Positive | 788940 - 789518 | 21897.1 |
| lyttr family two component transcriptional regulator | LV84_00702 | Not Available | Negative | 790195 - 790896 | 26879.7 |
| hypothetical protein | LV84_00703 | Not Available | Negative | 790877 - 791224 | 13641.3 |
| hypothetical protein | LV84_00704 | Not Available | Negative | 791241 - 791651 | 15767.2 |
| chey-like chemotaxis protein | LV84_00705 | Not Available | Negative | 791716 - 792126 | 15486.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
