Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gln | Not Available | Not Available | Positive | 778626 - 778701 | Not Available |
| hypothetical protein | LV84_00687 | Not Available | Positive | 779019 - 779264 | 9254.29 |
| large subunit ribosomal protein l9 | LV84_00688 | Not Available | Negative | 779318 - 779761 | 15905.4 |
| small subunit ribosomal protein s18 | LV84_00689 | Not Available | Negative | 779801 - 780052 | 9713.14 |
| small subunit ribosomal protein s6 | LV84_00690 | Not Available | Negative | 780049 - 780420 | 14524.8 |
| hypothetical protein | LV84_00691 | Not Available | Negative | 780767 - 781696 | 35418.2 |
| thiopurine s-methyltransferase | LV84_00692 | Not Available | Positive | 781714 - 782304 | 22296.3 |
| methyltransferase family protein | LV84_00693 | Not Available | Negative | 782293 - 783072 | 29954.8 |
| apag protein | LV84_00694 | Not Available | Negative | 783074 - 783460 | 14476.3 |
| uracil-dna glycosylase | LV84_00695 | Not Available | Positive | 783523 - 784185 | 24846.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
