Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s binding protein | LV84_00057 | Not Available | Negative | 72469 - 74013 | 58205.2 |
| pyridine nucleotide-disulfide oxidoreductase | LV84_00058 | Not Available | Negative | 74126 - 75481 | 51629.0 |
| uncharacterized protein duf547 | LV84_00059 | Not Available | Negative | 75531 - 76292 | 29036.8 |
| rhodanese-related sulfurtransferase | LV84_00060 | Not Available | Negative | 76382 - 76891 | 19219.0 |
| crp/fnr family transcriptional regulator | LV84_00061 | Not Available | Negative | 76928 - 77584 | 24020.2 |
| type i restriction and modification enzyme subunit r-like protein | LV84_00062 | Not Available | Negative | 77697 - 78170 | 18565.0 |
| dna uptake protein come-like dna-binding protein | LV84_00063 | Not Available | Negative | 78220 - 78903 | 26107.8 |
| glutamyl-trna reductase | LV84_00064 | Not Available | Positive | 79098 - 80363 | 47835.1 |
| wg repeat protein | LV84_00065 | Not Available | Positive | 80457 - 82022 | 58793.2 |
| uncharacterized protein yqfa (upf0365 family) | LV84_00066 | Not Available | Negative | 82037 - 83053 | 36132.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
