Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_00665 | Not Available | Positive | 750773 - 751108 | 12039.0 |
| hypothetical protein | LV84_00666 | Not Available | Positive | 751194 - 752201 | 38611.1 |
| hypothetical protein | LV84_00667 | Not Available | Positive | 752250 - 752468 | 7989.89 |
| hypothetical protein | LV84_00668 | Not Available | Positive | 752478 - 754295 | 68161.6 |
| tonb-linked susc/raga family outer membrane protein | LV84_00669 | Not Available | Positive | 754748 - 758035 | 119185.0 |
| putative outer membrane starch-binding protein | LV84_00670 | Not Available | Positive | 758090 - 759832 | 63438.7 |
| fg-gap repeat protein | LV84_00671 | Not Available | Positive | 759971 - 763495 | 129274.0 |
| creatinine amidohydrolase | LV84_00672 | Not Available | Negative | 763640 - 764446 | 30451.5 |
| n4-(beta-n-acetylglucosaminyl)-l-asparaginase | LV84_00673 | Not Available | Positive | 764610 - 765560 | 33443.3 |
| copper homeostasis protein | LV84_00674 | Not Available | Positive | 765557 - 766300 | 27333.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
