Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_00655 | Not Available | Positive | 740754 - 741233 | 18072.1 |
| lyttr family two component transcriptional regulator | LV84_00656 | Not Available | Negative | 741305 - 742048 | 28420.5 |
| histidine kinase | LV84_00657 | Not Available | Negative | 742157 - 743230 | 41512.2 |
| outer membrane receptor protein involved in fe transport | LV84_00658 | Not Available | Positive | 743567 - 746080 | 91350.8 |
| pyruvate dehydrogenase e1 component beta subunit | LV84_00659 | Not Available | Negative | 746471 - 747448 | 35938.4 |
| hypothetical protein | LV84_00660 | Not Available | Negative | 747532 - 747714 | 6950.61 |
| rhodanese-related sulfurtransferase | LV84_00661 | Not Available | Negative | 747836 - 748234 | 14747.1 |
| hypothetical protein | LV84_00662 | Not Available | Positive | 748304 - 748813 | 18861.0 |
| hypothetical protein | LV84_00663 | Not Available | Negative | 749060 - 749203 | 5508.98 |
| histidyl-trna synthetase | LV84_00664 | Not Available | Positive | 749370 - 750734 | 50820.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
