Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_00645 | Not Available | Negative | 730787 - 731002 | 7769.26 |
| peptidylprolyl isomerase/peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | LV84_00646 | Not Available | Negative | 731133 - 731990 | 32268.6 |
| putative dna-binding protein (mmcq/yjbr family) | LV84_00647 | Not Available | Positive | 732267 - 732617 | 13488.2 |
| iron(iii) transport system atp-binding protein | LV84_00648 | Not Available | Positive | 732614 - 733567 | 36088.5 |
| phosphatidate phosphatase app1 | LV84_00649 | Not Available | Positive | 733586 - 734725 | 43511.5 |
| cytochrome c | LV84_00650 | Not Available | Negative | 734729 - 735133 | 15092.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | LV84_00651 | Not Available | Negative | 735225 - 735755 | 19693.8 |
| methyltransferase family protein | LV84_00652 | Not Available | Negative | 735883 - 736602 | 27676.3 |
| membrane protein yfho | LV84_00653 | Not Available | Negative | 736589 - 739000 | 87809.8 |
| signal recognition particle subunit ffh/srp54 (srp54) | LV84_00654 | Not Available | Positive | 739162 - 740505 | 49094.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
