Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recq | LV84_00635 | Not Available | Negative | 720349 - 722526 | 82605.4 |
| arabinose-5-phosphate isomerase | LV84_00636 | Not Available | Positive | 722623 - 723591 | 34064.6 |
| mannose-1-phosphate guanylyltransferase | LV84_00637 | Not Available | Positive | 723600 - 724670 | 40803.2 |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | LV84_00638 | Not Available | Negative | 724702 - 725475 | 28321.7 |
| gwxtd domain-containing protein | LV84_00639 | Not Available | Negative | 725448 - 726683 | 47907.7 |
| methyltransferase family protein | LV84_00640 | Not Available | Positive | 726745 - 727521 | 29407.4 |
| multiple antibiotic resistance protein | LV84_00641 | Not Available | Negative | 727541 - 728101 | 20084.6 |
| hypothetical protein | LV84_00642 | Not Available | Negative | 728262 - 728405 | 5290.37 |
| sterol desaturase/sphingolipid hydroxylase (fatty acid hydroxylase superfamily) | LV84_00643 | Not Available | Negative | 728746 - 729630 | 35335.9 |
| dj-1/pfpi family protein | LV84_00644 | Not Available | Negative | 729891 - 730649 | 28209.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
