Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase family protein | LV84_00625 | Not Available | Negative | 708786 - 710207 | 52438.6 |
| trehalose utilization protein | LV84_00626 | Not Available | Positive | 710397 - 711419 | 37966.8 |
| d-psicose/d-tagatose/l-ribulose 3-epimerase | LV84_00627 | Not Available | Positive | 711546 - 712397 | 31592.3 |
| platelet-activating factor acetylhydrolase isoform ii | LV84_00628 | Not Available | Negative | 712440 - 713741 | 47562.6 |
| hypothetical protein | LV84_00629 | Not Available | Positive | 714074 - 715150 | 40489.4 |
| nucleoside-diphosphate-sugar epimerase | LV84_00630 | Not Available | Negative | 715243 - 716154 | 33963.3 |
| acetyltransferase (gnat) family protein | LV84_00631 | Not Available | Positive | 716446 - 716895 | 16831.2 |
| gliding motility-associated lipoprotein gldh | LV84_00632 | Not Available | Negative | 717054 - 717509 | 16945.3 |
| cell fate regulator yaat (psp1 superfamily) | LV84_00633 | Not Available | Negative | 717502 - 718914 | 53508.4 |
| phosphoribosylamine--glycine ligase | LV84_00634 | Not Available | Negative | 719048 - 720334 | 46232.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
