Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l1 | LV84_00575 | Not Available | Positive | 659592 - 660290 | 24758.3 |
| large subunit ribosomal protein l10 | LV84_00576 | Not Available | Positive | 660293 - 660835 | 19933.0 |
| large subunit ribosomal protein l7/l12 | LV84_00577 | Not Available | Positive | 660877 - 661254 | 12874.5 |
| dna-directed rna polymerase subunit beta | LV84_00578 | Not Available | Positive | 661411 - 665286 | 144730.0 |
| dna-directed rna polymerase subunit beta' | LV84_00579 | Not Available | Positive | 665335 - 669648 | 160417.0 |
| uncharacterized protein duf3467 | LV84_00580 | Not Available | Positive | 669713 - 670036 | 11684.9 |
| ssu ribosomal protein s12p | LV84_00581 | Not Available | Positive | 670135 - 670560 | 15348.9 |
| small subunit ribosomal protein s7 | LV84_00582 | Not Available | Positive | 670578 - 671045 | 17736.8 |
| elongation factor g | LV84_00583 | Not Available | Positive | 671050 - 673173 | 78303.6 |
| ssu ribosomal protein s10p | LV84_00584 | Not Available | Positive | 673186 - 673491 | 11300.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
