Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pap2 superfamily protein | LV84_00555 | Not Available | Negative | 631919 - 633259 | 49754.8 |
| fg-gap repeat protein | LV84_00556 | Not Available | Negative | 633382 - 636648 | 119910.0 |
| vcbs repeat protein | LV84_00557 | Not Available | Negative | 636650 - 639949 | 121630.0 |
| hypothetical protein | LV84_00558 | Not Available | Negative | 639946 - 640536 | 22712.4 |
| vcbs repeat protein | LV84_00559 | Not Available | Negative | 640505 - 643789 | 122202.0 |
| putative outer membrane starch-binding protein | LV84_00560 | Not Available | Negative | 643857 - 645317 | 53858.0 |
| iron complex outermembrane receptor protein | LV84_00561 | Not Available | Negative | 645367 - 648360 | 108947.0 |
| carboxypeptidase-like protein | LV84_00562 | Not Available | Positive | 648880 - 651528 | 101114.0 |
| ribosome recycling factor | LV84_00563 | Not Available | Negative | 651583 - 652143 | 20832.3 |
| uridylate kinase | LV84_00564 | Not Available | Negative | 652155 - 652865 | 26190.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
