Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kdo2-lipid iv(a) lauroyltransferase | LV84_00545 | Not Available | Negative | 622886 - 623725 | 33409.9 |
| rna polymerase ecf family sigma subunit | LV84_00546 | Not Available | Positive | 623850 - 624455 | 23533.5 |
| mycothiol system anti-sigma-r factor | LV84_00547 | Not Available | Positive | 624468 - 624734 | 10114.1 |
| guanylate kinase | LV84_00548 | Not Available | Positive | 624737 - 625309 | 21299.2 |
| nicotinate-nucleotide adenylyltransferase | LV84_00549 | Not Available | Positive | 625346 - 625912 | 21864.3 |
| gh15 family glucan-1,4-alpha-glucosidase | LV84_00550 | Not Available | Positive | 626017 - 627798 | 67687.5 |
| hypothetical protein | LV84_00551 | Not Available | Positive | 627975 - 628145 | 6680.76 |
| n-acetyl-anhydromuramyl-l-alanine amidase ampd | LV84_00552 | Not Available | Positive | 628270 - 629163 | 33994.3 |
| hypothetical protein | LV84_00553 | Not Available | Negative | 629331 - 629465 | 4984.1 |
| trehalose 6-phosphate synthase/phosphatase | LV84_00554 | Not Available | Negative | 629568 - 631742 | 83578.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
