Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chey-like chemotaxis protein | LV84_00535 | Not Available | Negative | 611506 - 611952 | 16857.7 |
| putative nif3 family gtp cyclohydrolase 1 type 2 | LV84_00536 | Not Available | Negative | 612109 - 612990 | 32621.6 |
| hypothetical protein | LV84_00537 | Not Available | Negative | 613131 - 613778 | 24454.7 |
| short-subunit dehydrogenase | LV84_00538 | Not Available | Negative | 613808 - 614599 | 29982.9 |
| hypothetical protein | LV84_00539 | Not Available | Negative | 614589 - 615224 | 23757.7 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | LV84_00540 | Not Available | Negative | 615256 - 616017 | 26649.9 |
| dihydroxy-acid dehydratase | LV84_00541 | Not Available | Negative | 616020 - 617738 | 62448.8 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | LV84_00542 | Not Available | Negative | 618190 - 619494 | 47560.4 |
| uncharacterized protein duf4290 | LV84_00543 | Not Available | Negative | 619494 - 620144 | 25313.2 |
| dna helicase-2/atp-dependent dna helicase pcra | LV84_00544 | Not Available | Negative | 620247 - 622517 | 86507.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
