Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase rhle | LV84_00515 | Not Available | Positive | 589140 - 590510 | 51521.4 |
| alpha/beta hydrolase family protein | LV84_00516 | Not Available | Positive | 590583 - 591746 | 44302.5 |
| amidohydrolase | LV84_00517 | Not Available | Negative | 591842 - 593158 | 46914.1 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | LV84_00518 | Not Available | Positive | 593290 - 593988 | 25353.2 |
| ahpc/tsa family protein | LV84_00519 | Not Available | Positive | 594161 - 594679 | 19062.1 |
| abc-2 type transport system atp-binding protein | LV84_00520 | Not Available | Positive | 594909 - 595817 | 33569.0 |
| abc-2 type transport system permease protein | LV84_00521 | Not Available | Positive | 595930 - 596649 | 26313.9 |
| hypothetical protein | LV84_00522 | Not Available | Positive | 596646 - 596804 | 6094.4 |
| gliding-associated putative abc transporter substrate-binding component gldg | LV84_00523 | Not Available | Positive | 596805 - 598493 | 62870.0 |
| dna polymerase-3 subunit beta | LV84_00524 | Not Available | Positive | 598614 - 599738 | 41579.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
