Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonic-acid transferase | LV84_00505 | Not Available | Positive | 578764 - 580026 | 48288.3 |
| ribosome biogenesis gtpase | LV84_00506 | Not Available | Positive | 580112 - 581035 | 34680.4 |
| pyrimidine operon attenuation protein/uracil phosphoribosyltransferase | LV84_00507 | Not Available | Positive | 581177 - 581680 | 18904.0 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | LV84_00508 | Not Available | Positive | 581685 - 582506 | 29657.0 |
| alpha-amylase | LV84_00509 | Not Available | Negative | 582841 - 584040 | 46444.1 |
| glycosyltransferase involved in cell wall biosynthesis | LV84_00510 | Not Available | Negative | 584037 - 585326 | 48354.1 |
| putative glycogen debranching enzyme | LV84_00511 | Not Available | Negative | 585333 - 587252 | 73125.8 |
| hypothetical protein | LV84_00512 | Not Available | Negative | 587361 - 587501 | 5498.76 |
| Trna-his | Not Available | Not Available | Positive | 587594 - 587669 | Not Available |
| dihydroorotase | LV84_00514 | Not Available | Negative | 587748 - 589091 | 49807.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
