Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate kinase | LV84_00395 | Not Available | Positive | 473053 - 474177 | 41830.3 |
| gtp-binding protein | LV84_00396 | Not Available | Positive | 474252 - 475247 | 36052.1 |
| molecular chaperone grpe | LV84_00397 | Not Available | Positive | 475355 - 475885 | 19936.5 |
| molecular chaperone dnaj | LV84_00398 | Not Available | Positive | 475890 - 477008 | 39913.9 |
| hypothetical protein | LV84_00399 | Not Available | Positive | 477087 - 477974 | 32690.6 |
| abc-2 type transport system atp-binding protein | LV84_00400 | Not Available | Positive | 477992 - 478885 | 33744.2 |
| abc-2 type transport system permease protein | LV84_00401 | Not Available | Positive | 478878 - 480188 | 48853.3 |
| starvation-inducible dna-binding protein | LV84_00402 | Not Available | Negative | 480452 - 480922 | 17794.2 |
| histidine kinase/dna gyrase b/hsp90-like atpase | LV84_00403 | Not Available | Positive | 481161 - 482396 | 47130.9 |
| peptide chain release factor 3 | LV84_00404 | Not Available | Positive | 482725 - 484314 | 60375.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
