Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_00385 | Not Available | Negative | 457645 - 459372 | 66528.3 |
| membrane dipeptidase | LV84_00386 | Not Available | Positive | 459486 - 460799 | 48287.5 |
| atp-dependent clp protease atp-binding subunit clpb | LV84_00387 | Not Available | Positive | 461135 - 463753 | 98117.9 |
| hypothetical protein | LV84_00388 | Not Available | Negative | 464014 - 464682 | 26484.5 |
| hypothetical protein | LV84_00389 | Not Available | Negative | 464736 - 465023 | 10362.5 |
| carbohydrate binding protein with cbm9 domain | LV84_00390 | Not Available | Negative | 465644 - 467821 | 83673.1 |
| outer membrane receptor protein involved in fe transport | LV84_00391 | Not Available | Negative | 467911 - 470313 | 91104.9 |
| hypothetical protein | LV84_00392 | Not Available | Positive | 470442 - 470582 | 5270.65 |
| oop family ompa-ompf porin | LV84_00393 | Not Available | Negative | 470673 - 471962 | 46566.5 |
| putative aminopeptidase frvx | LV84_00394 | Not Available | Positive | 472135 - 473043 | 34155.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
