Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | LV84_00375 | Not Available | Positive | 440822 - 444061 | 116963.0 |
| susd-like starch-binding protein associating with outer membrane | LV84_00376 | Not Available | Positive | 444080 - 445729 | 60606.3 |
| hypothetical protein | LV84_00377 | Not Available | Positive | 445749 - 446699 | 33835.9 |
| 2-oxoglutarate dehydrogenase e1 component | LV84_00378 | Not Available | Positive | 446839 - 449637 | 105746.0 |
| 2-oxoglutarate dehydrogenase e2 component | LV84_00379 | Not Available | Positive | 449726 - 451264 | 55019.6 |
| dihydrolipoamide dehydrogenase | LV84_00380 | Not Available | Positive | 451415 - 452812 | 50385.0 |
| putative short-subunit dehydrogenase-like oxidoreductase (duf2520 family) | LV84_00381 | Not Available | Positive | 452896 - 453669 | 28614.0 |
| putative amidohydrolase | LV84_00382 | Not Available | Negative | 453750 - 455288 | 58387.1 |
| acyl-[acyl-carrier-protein] desaturase | LV84_00383 | Not Available | Negative | 455450 - 456448 | 37350.6 |
| hypothetical protein | LV84_00384 | Not Available | Negative | 456759 - 457643 | 31621.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
