Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system phosphate regulon sensor histidine kinase phor | LV84_00355 | Not Available | Positive | 421609 - 422664 | 39892.6 |
| 23s rrna pseudouridine955/2504/2580 synthase | LV84_00356 | Not Available | Positive | 422764 - 423474 | 26763.3 |
| large subunit ribosomal protein l13 | LV84_00357 | Not Available | Positive | 423656 - 424099 | 16311.8 |
| small subunit ribosomal protein s9 | LV84_00358 | Not Available | Positive | 424109 - 424495 | 14638.0 |
| ssu ribosomal protein s2p | LV84_00359 | Not Available | Positive | 424529 - 425293 | 28478.8 |
| elongation factor ts | LV84_00360 | Not Available | Positive | 425502 - 426332 | 29869.9 |
| thiamine-monophosphate kinase | LV84_00361 | Not Available | Negative | 426572 - 427600 | 37161.6 |
| methylmalonyl-coa epimerase | LV84_00362 | Not Available | Negative | 427872 - 428273 | 14863.8 |
| iron-sulfur cluster assembly protein | LV84_00363 | Not Available | Positive | 428363 - 428689 | 11765.0 |
| aminomethyltransferase | LV84_00364 | Not Available | Positive | 428797 - 429891 | 39696.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
