Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_03588 | Not Available | Positive | 4181300 - 4182106 | 30495.2 |
| uroporphyrinogen decarboxylase | LV84_03589 | Not Available | Negative | 4182300 - 4183322 | 37893.0 |
| hypothetical protein | LV84_03590 | Not Available | Negative | 4183438 - 4183986 | 20191.7 |
| hypothetical protein | LV84_03591 | Not Available | Negative | 4184067 - 4184582 | 19088.6 |
| hypothetical protein | LV84_03592 | Not Available | Negative | 4184585 - 4185166 | 21358.4 |
| atp-binding cassette subfamily b protein | LV84_03593 | Not Available | Negative | 4185205 - 4186977 | 66925.1 |
| trna pseudouridine38-40 synthase | LV84_03594 | Not Available | Negative | 4186984 - 4187742 | 29086.8 |
| uncharacterized protein duf4293 | LV84_03595 | Not Available | Positive | 4187845 - 4188321 | 17690.0 |
| cystathionine gamma-synthase | LV84_03596 | Not Available | Positive | 4188714 - 4189814 | 39603.6 |
| hypothetical protein | LV84_03597 | Not Available | Negative | 4189747 - 4189914 | 6120.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
