Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf4295 | LV84_03578 | Not Available | Negative | 4171794 - 4171946 | 5480.86 |
| large subunit ribosomal protein l33 | LV84_03579 | Not Available | Negative | 4171984 - 4172166 | 6942.66 |
| large subunit ribosomal protein l28 | LV84_03580 | Not Available | Negative | 4172197 - 4172439 | 9113.25 |
| ornithine--oxo-acid transaminase | LV84_03581 | Not Available | Positive | 4172776 - 4174011 | 45123.0 |
| had superfamily hydrolase (tigr01509 family) | LV84_03582 | Not Available | Positive | 4174121 - 4174774 | 24101.9 |
| porphobilinogen synthase | LV84_03583 | Not Available | Positive | 4174778 - 4175746 | 35909.1 |
| putative ompl-like beta-barrel porin-2 | LV84_03584 | Not Available | Positive | 4176601 - 4177782 | 42057.0 |
| hypothetical protein | LV84_03585 | Not Available | Positive | 4178080 - 4178367 | 10591.0 |
| co-chaperonin groes (hsp10) | LV84_03586 | Not Available | Negative | 4178435 - 4178809 | 13882.9 |
| molecular chaperone dnak | LV84_03587 | Not Available | Negative | 4178934 - 4180859 | 69076.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
