Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phopq-activated pathogenicity-related protein | LV84_03548 | Not Available | Positive | 4138567 - 4140009 | 54413.2 |
| metallo-beta-lactamase superfamily protein | LV84_03549 | Not Available | Positive | 4140435 - 4141712 | 47606.6 |
| sugar porter (sp) family mfs transporter | LV84_03550 | Not Available | Negative | 4141736 - 4143139 | 51736.0 |
| dna-binding xre family transcriptional regulator | LV84_03551 | Not Available | Positive | 4144106 - 4144315 | 7766.41 |
| histidine kinase/dna gyrase b/hsp90-like atpase | LV84_03552 | Not Available | Positive | 4144320 - 4146761 | 93371.4 |
| hypothetical protein | LV84_03553 | Not Available | Positive | 4146766 - 4147392 | 24276.5 |
| hnh endonuclease | LV84_03554 | Not Available | Positive | 4147385 - 4147945 | 22470.7 |
| n-6 dna methylase | LV84_03555 | Not Available | Positive | 4147942 - 4149780 | 71545.4 |
| pas domain s-box-containing protein | LV84_03556 | Not Available | Positive | 4150283 - 4151374 | 40997.5 |
| ectoine hydroxylase-related dioxygenase (phytanoyl-coa dioxygenase family) | LV84_03557 | Not Available | Negative | 4151522 - 4152319 | 30397.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
