Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_03538 | Not Available | Negative | 4124199 - 4124819 | 23221.3 |
| uncharacterized protein duf1460 | LV84_03539 | Not Available | Positive | 4125304 - 4126059 | 28228.7 |
| uncharacterized protein ybjt (duf2867 family) | LV84_03540 | Not Available | Positive | 4126277 - 4126939 | 23875.6 |
| hypothetical protein | LV84_03541 | Not Available | Negative | 4127146 - 4128990 | 71618.8 |
| abc-2 type transport system atp-binding protein | LV84_03542 | Not Available | Positive | 4129409 - 4130041 | 23324.2 |
| hypothetical protein | LV84_03543 | Not Available | Positive | 4130034 - 4131095 | 41734.6 |
| putative outer membrane starch-binding protein | LV84_03544 | Not Available | Negative | 4131177 - 4132847 | 61705.2 |
| tonb-linked susc/raga family outer membrane protein | LV84_03545 | Not Available | Negative | 4132858 - 4136268 | 125538.0 |
| fecr family protein | LV84_03546 | Not Available | Negative | 4136388 - 4137344 | 35410.7 |
| rna polymerase sigma-70 factor (ecf subfamily) | LV84_03547 | Not Available | Negative | 4137493 - 4138071 | 22371.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
