Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine-protein kinase hipa | LV84_03528 | Not Available | Negative | 4111092 - 4112099 | 37802.3 |
| serine/threonine-protein kinase hipa | LV84_03529 | Not Available | Negative | 4112099 - 4112425 | 12580.1 |
| helix-turn-helix protein | LV84_03530 | Not Available | Negative | 4112422 - 4112637 | 7948.9 |
| 3',5'-cyclic amp phosphodiesterase cpda | LV84_03531 | Not Available | Positive | 4113187 - 4114290 | 41552.4 |
| endonuclease/exonuclease/phosphatase family metal-dependent hydrolase | LV84_03532 | Not Available | Positive | 4114420 - 4115355 | 35599.1 |
| hypothetical protein | LV84_03533 | Not Available | Negative | 4115904 - 4116209 | 11812.5 |
| micrococcal nuclease | LV84_03534 | Not Available | Negative | 4116154 - 4116324 | 6496.99 |
| papain like protease | LV84_03535 | Not Available | Negative | 4116384 - 4119662 | 126086.0 |
| tubulin-like protein | LV84_03536 | Not Available | Negative | 4119659 - 4122448 | 104699.0 |
| hypothetical protein | LV84_03537 | Not Available | Negative | 4122461 - 4124188 | 65596.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
