Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclically-permuted mutarotase family protein | LV84_03518 | Not Available | Negative | 4091573 - 4092853 | 46037.8 |
| signal transduction histidine kinase | LV84_03519 | Not Available | Positive | 4093460 - 4097704 | 159399.0 |
| glycosyl hydrolase family 20 | LV84_03520 | Not Available | Negative | 4097790 - 4099832 | 77818.8 |
| hexosaminidase | LV84_03521 | Not Available | Negative | 4099846 - 4100964 | 42824.3 |
| hexosaminidase | LV84_03522 | Not Available | Negative | 4100982 - 4101500 | 19421.5 |
| glycosyl hydrolase family 16 | LV84_03523 | Not Available | Negative | 4101553 - 4102407 | 32619.3 |
| putative outer membrane starch-binding protein | LV84_03524 | Not Available | Negative | 4102533 - 4104527 | 72986.8 |
| tonb-linked susc/raga family outer membrane protein | LV84_03525 | Not Available | Negative | 4104540 - 4107800 | 120511.0 |
| hypothetical protein | LV84_03526 | Not Available | Positive | 4108466 - 4108660 | 7115.72 |
| hydroxylysine kinase /5-phosphonooxy-l-lysine phospho-lyase | LV84_03527 | Not Available | Positive | 4108808 - 4111075 | 84208.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
