Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase is200 family protein | LV84_03508 | Not Available | Negative | 4080351 - 4080872 | 20703.1 |
| hypothetical protein | LV84_03509 | Not Available | Negative | 4081210 - 4082145 | 34832.9 |
| hypothetical protein | LV84_03510 | Not Available | Negative | 4082151 - 4083017 | 31379.5 |
| hypothetical protein | LV84_03511 | Not Available | Positive | 4083087 - 4083554 | 18007.5 |
| isoquinoline 1-oxidoreductase beta subunit | LV84_03512 | Not Available | Negative | 4083599 - 4085884 | 83071.8 |
| isoquinoline 1-oxidoreductase alpha subunit | LV84_03513 | Not Available | Negative | 4085908 - 4086366 | 16163.5 |
| putative dehydrogenase | LV84_03514 | Not Available | Negative | 4086553 - 4087842 | 48848.2 |
| Trna-asn | Not Available | Not Available | Positive | 4088101 - 4088177 | Not Available |
| alpha galactosidase a | LV84_03516 | Not Available | Negative | 4088667 - 4089923 | 46717.6 |
| sialidase-1 | LV84_03517 | Not Available | Negative | 4090005 - 4091540 | 55942.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
