Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein tolc | LV84_03488 | Not Available | Positive | 4050411 - 4051826 | 52781.9 |
| cu(i)/ag(i) efflux system membrane fusion protein | LV84_03489 | Not Available | Positive | 4051831 - 4053612 | 64477.3 |
| protein of unknown function (duf305) | LV84_03490 | Not Available | Positive | 4053754 - 4054212 | 17450.1 |
| hypothetical protein | LV84_03491 | Not Available | Positive | 4054219 - 4056642 | 92232.4 |
| cu2+-exporting atpase | LV84_03492 | Not Available | Positive | 4056677 - 4058710 | 73298.2 |
| protein of unknown function (duf2911) | LV84_03493 | Not Available | Positive | 4058734 - 4059333 | 22211.1 |
| uncharacterized protein duf3347 | LV84_03494 | Not Available | Positive | 4059465 - 4060019 | 19951.7 |
| hypothetical protein | LV84_03495 | Not Available | Positive | 4060332 - 4063562 | 123137.0 |
| hypothetical protein | LV84_03496 | Not Available | Positive | 4063559 - 4064044 | 19114.1 |
| hypothetical protein | LV84_03497 | Not Available | Positive | 4064143 - 4065063 | 35264.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
