Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_03478 | Not Available | Negative | 4037656 - 4038408 | 28325.2 |
| cupin domain-containing protein | LV84_03479 | Not Available | Negative | 4038582 - 4039319 | 27268.7 |
| polyisoprenoid-binding protein ycei | LV84_03480 | Not Available | Positive | 4039586 - 4040164 | 21215.3 |
| cu2+-exporting atpase | LV84_03481 | Not Available | Positive | 4040531 - 4042759 | 79748.2 |
| copper chaperone copz | LV84_03482 | Not Available | Positive | 4042900 - 4043109 | 7641.18 |
| putative atpase | LV84_03483 | Not Available | Positive | 4043194 - 4043979 | 29442.4 |
| putative membrane protein | LV84_03484 | Not Available | Negative | 4043995 - 4045206 | 45578.1 |
| putative chy-type zn-finger protein | LV84_03485 | Not Available | Positive | 4045408 - 4045827 | 15585.7 |
| hypothetical protein | LV84_03486 | Not Available | Positive | 4046030 - 4046407 | 13964.7 |
| cu(i)/ag(i) efflux system membrane protein cusa/sila | LV84_03487 | Not Available | Positive | 4046505 - 4050314 | 140829.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
