Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | LV84_03448 | Not Available | Negative | 4009864 - 4011813 | 73520.9 |
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | LV84_03449 | Not Available | Negative | 4011890 - 4012675 | 28961.5 |
| hypothetical protein | LV84_03450 | Not Available | Negative | 4012681 - 4013331 | 24781.8 |
| 3,4-dihydroxy 2-butanone 4-phosphate synthase/gtp cyclohydrolase ii | LV84_03451 | Not Available | Negative | 4013414 - 4014676 | 46498.5 |
| dna primase | LV84_03452 | Not Available | Negative | 4014712 - 4016649 | 73035.4 |
| atp-binding protein involved in chromosome partitioning | LV84_03453 | Not Available | Positive | 4016821 - 4017915 | 39341.0 |
| fe-s cluster biogenesis protein nfua | LV84_03454 | Not Available | Positive | 4017921 - 4018169 | 9074.15 |
| putative secreted protein (por secretion system target) | LV84_03455 | Not Available | Positive | 4018183 - 4021260 | 112647.0 |
| beta-lactam-binding protein with pasta domain | LV84_03456 | Not Available | Positive | 4021433 - 4022146 | 26195.8 |
| putative secreted protein (por secretion system target) | LV84_03457 | Not Available | Positive | 4022152 - 4023993 | 69663.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
