Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptidase b | LV84_03438 | Not Available | Positive | 3996762 - 3998804 | 77927.4 |
| methylglyoxal synthase | LV84_03439 | Not Available | Positive | 3998898 - 3999269 | 13367.4 |
| 6-phosphofructokinase | LV84_03440 | Not Available | Positive | 3999273 - 4000259 | 35249.7 |
| hypothetical protein | LV84_03441 | Not Available | Negative | 4000367 - 4000726 | 14329.2 |
| glycosidase | LV84_03442 | Not Available | Negative | 4000872 - 4002419 | 58879.8 |
| fructose-bisphosphate aldolase | LV84_03443 | Not Available | Negative | 4002493 - 4003554 | 39347.6 |
| laci family transcriptional regulator | LV84_03444 | Not Available | Positive | 4003916 - 4004947 | 38207.0 |
| alpha-glucosidase | LV84_03445 | Not Available | Positive | 4005132 - 4007570 | 91695.3 |
| maltose/moltooligosaccharide transporter | LV84_03446 | Not Available | Positive | 4007601 - 4008926 | 48893.5 |
| hypothetical protein | LV84_03447 | Not Available | Positive | 4009006 - 4009878 | 32797.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
