Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_03428 | Not Available | Negative | 3978972 - 3983189 | 159687.0 |
| hypothetical protein | LV84_03429 | Not Available | Negative | 3983215 - 3988518 | 192790.0 |
| ferrous iron transport protein a | LV84_03430 | Not Available | Positive | 3989081 - 3989326 | 8820.97 |
| ferrous iron transport protein b | LV84_03431 | Not Available | Positive | 3989332 - 3991464 | 79154.4 |
| o-antigen/teichoic acid export membrane protein | LV84_03432 | Not Available | Positive | 3991635 - 3993110 | 55175.9 |
| nucleotide-binding universal stress uspa family protein | LV84_03433 | Not Available | Positive | 3993545 - 3994465 | 34164.7 |
| rna polymerase sigma-70 factor (ecf subfamily) | LV84_03434 | Not Available | Positive | 3994573 - 3995121 | 21490.8 |
| hypothetical protein | LV84_03435 | Not Available | Positive | 3995156 - 3995512 | 14062.6 |
| hypothetical protein | LV84_03436 | Not Available | Positive | 3995515 - 3995955 | 17258.9 |
| large conductance mechanosensitive channel | LV84_03437 | Not Available | Negative | 3996160 - 3996576 | 14771.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
