Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xaa-pro aminopeptidase | LV84_03418 | Not Available | Negative | 3968649 - 3970001 | 50952.7 |
| mate family multidrug resistance protein | LV84_03419 | Not Available | Negative | 3970072 - 3971427 | 49166.2 |
| 8-oxo-dgtp pyrophosphatase mutt (nudix family) | LV84_03420 | Not Available | Negative | 3971429 - 3971971 | 20365.4 |
| dna-binding lrp family transcriptional regulator | LV84_03421 | Not Available | Negative | 3972027 - 3972509 | 17876.0 |
| hypothetical protein | LV84_03422 | Not Available | Negative | 3972719 - 3973912 | 46387.0 |
| hypothetical protein | LV84_03423 | Not Available | Positive | 3973992 - 3974642 | 25419.6 |
| uncharacterized protein duf4394 | LV84_03424 | Not Available | Negative | 3974712 - 3976232 | 53064.7 |
| hypothetical protein | LV84_03425 | Not Available | Negative | 3976351 - 3977157 | 28360.3 |
| nucleotide-binding universal stress uspa family protein | LV84_03426 | Not Available | Positive | 3977372 - 3978175 | 29808.3 |
| crp/fnr family transcriptional regulator | LV84_03427 | Not Available | Negative | 3978176 - 3978832 | 25117.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
