Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-6 dna methylase | LV84_03408 | Not Available | Negative | 3955534 - 3958656 | 120494.0 |
| hypothetical protein | LV84_03409 | Not Available | Negative | 3958745 - 3959032 | 10540.5 |
| hypothetical protein | LV84_03410 | Not Available | Positive | 3959237 - 3959812 | 22844.1 |
| putative abc transport system permease protein | LV84_03411 | Not Available | Positive | 3960235 - 3962661 | 91484.8 |
| cytochrome c | LV84_03412 | Not Available | Positive | 3962932 - 3965595 | 99128.9 |
| uncharacterized protein with zn-ribbon domain duf2116 | LV84_03413 | Not Available | Positive | 3965678 - 3966046 | 14456.3 |
| superfamily ii dna/rna helicase | LV84_03414 | Not Available | Positive | 3966094 - 3967425 | 49737.5 |
| hypothetical protein | LV84_03415 | Not Available | Positive | 3967535 - 3967693 | 5979.34 |
| hypothetical protein | LV84_03416 | Not Available | Negative | 3967754 - 3968016 | 9747.66 |
| mfs transporter | LV84_03417 | Not Available | Positive | 3968058 - 3968513 | 16121.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
