Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tir domain-containing protein | LV84_03388 | Not Available | Negative | 3932318 - 3932980 | 25181.4 |
| hypothetical protein | LV84_03389 | Not Available | Negative | 3933051 - 3933812 | 28998.8 |
| uncharacterized protein (duf2141 family) | LV84_03390 | Not Available | Negative | 3933975 - 3934403 | 15725.9 |
| o-succinylbenzoic acid--coa ligase | LV84_03391 | Not Available | Negative | 3934510 - 3935574 | 39698.1 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | LV84_03392 | Not Available | Positive | 3935579 - 3936517 | 34575.3 |
| cubico group peptidase (beta-lactamase class c family) | LV84_03393 | Not Available | Negative | 3936730 - 3937953 | 45579.7 |
| alpha-beta hydrolase superfamily lysophospholipase | LV84_03394 | Not Available | Positive | 3938029 - 3938874 | 31641.1 |
| catechol 2,3-dioxygenase | LV84_03395 | Not Available | Negative | 3938884 - 3939375 | 18183.6 |
| atp-dependent exodnase (exonuclease v) beta subunit | LV84_03396 | Not Available | Positive | 3939634 - 3942885 | 124348.0 |
| pd-(d/e)xk nuclease superfamily protein | LV84_03397 | Not Available | Positive | 3942878 - 3945715 | 109205.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
