Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative permease | LV84_03378 | Not Available | Positive | 3920638 - 3923055 | 89153.7 |
| hypothetical protein | LV84_03379 | Not Available | Positive | 3923159 - 3923278 | 4380.31 |
| hypothetical protein | LV84_03380 | Not Available | Negative | 3923275 - 3924153 | 32324.2 |
| crp-like camp-binding protein | LV84_03381 | Not Available | Negative | 3924401 - 3925030 | 24031.3 |
| luciferase family oxidoreductase group 1 | LV84_03382 | Not Available | Negative | 3925152 - 3926144 | 36607.5 |
| hypothetical protein | LV84_03383 | Not Available | Positive | 3926491 - 3926625 | 4884.01 |
| carboxypeptidase-like protein | LV84_03384 | Not Available | Negative | 3927012 - 3929864 | 108020.0 |
| hypothetical protein | LV84_03385 | Not Available | Positive | 3930077 - 3930334 | 9814.81 |
| transcriptional regulator with xre-family hth domain | LV84_03386 | Not Available | Positive | 3930331 - 3931104 | 28725.3 |
| tir domain-containing protein | LV84_03387 | Not Available | Negative | 3931101 - 3932198 | 41754.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
