Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| para-nitrobenzyl esterase | LV84_03358 | Not Available | Negative | 3880491 - 3882134 | 59814.2 |
| adp-ribose pyrophosphatase yjhb (nudix family) | LV84_03359 | Not Available | Positive | 3882226 - 3882927 | 27239.0 |
| uncharacterized protein yjbi with pentapeptide repeats | LV84_03360 | Not Available | Negative | 3882949 - 3883515 | 21752.9 |
| hypothetical protein | LV84_03361 | Not Available | Negative | 3883735 - 3884328 | 21771.3 |
| hypothetical protein | LV84_03362 | Not Available | Negative | 3884473 - 3885606 | 42505.9 |
| alpha-l-fucosidase 2 | LV84_03363 | Not Available | Negative | 3885701 - 3888037 | 87341.0 |
| hypothetical protein | LV84_03364 | Not Available | Negative | 3888216 - 3890828 | 97016.2 |
| hypothetical protein | LV84_03365 | Not Available | Negative | 3890931 - 3891761 | 30345.6 |
| uncharacterized protein duf4402 | LV84_03366 | Not Available | Negative | 3891810 - 3892343 | 17995.2 |
| hypothetical protein | LV84_03367 | Not Available | Negative | 3892719 - 3893183 | 17217.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
